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PUBLICATIONS

Our core members have published more than 100 paper in collaboration with other ELLIS fellows or scholars from outside the unit Jena since 2021.
2024

Early warning of complex climate risk with integrated artificial intelligence

Markus Reichstein, Dorothea Frank, Vitus Benson, Gustau Camps-Valls, Joachim Denzler, Kai Kornhuber, Bernhard Schoelkopf, Ricardo Vinuesa, Boran Han, Carina Fearnley, Nasim Rahaman, José María Tarraga, Jan Blunk, Karen Dall, Giulia Martini, Naomi Nganga, Danielle Robinson
Apr 16, 2024

DeepPhenoMem V1.0: Deep learning modelling of canopy greenness dynamics accounting for multi-variate meteorological memory effects on vegetation phenology

Guohua Liu, Mirco Migliavacca, Christian Reimers, Basil Kraft, Markus Reichstein, Andrew Richardson, Lisa Wingate, Nicolas Delpierre, Hui Yang, Alexander Winkler
Mar 7, 2024

A New Post‐Hoc Method to Reduce the Energy Imbalance in Eddy Covariance Measurements

Weijie Zhang, Jacob A Nelson, Diego G Miralles, Matthias Mauder, Mirco Migliavacca, Rafael Poyatos, Markus Reichstein, Martin Jung
Jan 27, 2024

Spatial patterns of vegetation activity related to ENSO in northern South America

Lina M Estupinan‐Suarez, Miguel D Mahecha, Alexander Brenning, Guido Kraemer, Germán Poveda, Markus Reichstein, Carlos A Sierra
Jan 5, 2024

Biodiversity and climate extremes: known interactions and research gaps

Miguel D Mahecha, Ana Bastos, Friedrich Bohn, Nico Eisenhauer, Hannes Feilhauer, Thomas Hickler, Heike Kalesse-Los, Mirco Migliavacca, Friederike Elly Luise Otto, Jian Peng, Ina Tegen, Alexandra Weigelt, Manfred Wendisch, Christian Wirth, Djamil Al-Halbouni, Hartwig M Deneke, Daniel Doktor, Susanne Dunker, André Ehrlich, Andreas Foth, Almudena García-García, Carlos A Guerra, Claudia Guimarães-Steinicke, Henrik Hartmann, Silvia Henning, Hartmut Herrmann, Chaonan Ji, Teja Kattenborn, Nina Kolleck, Marlene Kretschmer, Ingolf Kühn, Marie Luise Luttkus, Maximilian Maahn, Milena Mönks, Karin Mora, Mira Pöhlker, Markus Reichstein, Nadja Rüger, Beatriz Sánchez-Parra, Michael Schäfer, Sebastian Sippel, Matthias Tesche, Birgit Wehner, Sebastian Wieneke, Alexander Winkler, Sophie Wolf, Sönke Zaehle, Jakob Zscheischler, Johannes Quaas
Jun 4, 2024

Flagging inconsistencies in flux tower data

Martin Jung, Jacob Nelson, Mirco Migliavacca, Tarek El-Madany, Dario Papale, Markus Reichstein, Sophia Walther, Thomas Wutzler
APR 15, 2024

How atmospheric CO2 can inform us on annual and decadal shifts in the biospheric carbon uptake period

Theertha Kariyathan, Ana Bastos, Markus Reichstein, Wouter Peters, Julia Marshall
JUL 5, 2024

Causal hybrid modeling with double machine learning-Applications in carbon flux modeling

Kai-Hendrik Cohrs, Gherardo Varando, Nuno Carvalhais, Markus Reichstein, Gustau Camps-Valls
JUN 20, 2024

Spatial patterns of vegetation activity related to ENSO in northern South America

Lina M Estupinan‐Suarez, Miguel D Mahecha, Alexander Brenning, Guido Kraemer, Germán Poveda, Markus Reichstein, Carlos A Sierra
Jan 5, 2024

X-BASE: the first terrestrial carbon and water flux products from an extended data-driven scaling framework, FLUXCOM-X

Jacob A Nelson, Sophia Walther, Fabian Gans, Basil Kraft, Ulrich Weber, Kimberly Novick, Nina Buchmann, Mirco Migliavacca, Georg Wohlfahrt, Ladislav Šigut, Andreas Ibrom, Dario Papale, Mathias Göckede, Gregory Duveiller, Alexander Knohl, Lukas Hörtnagl, Russell L Scott, Weijie Zhang, Zayd Mahmoud Hamdi, Markus Reichstein, Sergio Aranda-Barranco, Jonas Ardö, Maarten Op de Beeck, Dave Billdesbach, David Bowling, Rosvel Bracho, Christian Brümmer, Gustau Camps-Valls, Shiping Chen, Jamie Rose Cleverly, Ankur Desai, Gang Dong, Tarek S El-Madany, Eugenie Susanne Euskirchen, Iris Feigenwinter, Marta Galvagno, Giacomo Gerosa, Bert Gielen, Ignacio Goded, Sarah Goslee, Christopher Michael Gough, Bernard Heinesch, Kazuhito Ichii, Marcin Antoni Jackowicz-Korczynski, Anne Klosterhalfen, Sara Knox, Hideki Kobayashi, Kukka-Maaria Kohonen, Mika Korkiakoski, Ivan Mammarella, Gharun Mana, Riccardo Marzuoli, Roser Matamala, Stefan Metzger, Leonardo Montagnani, Giacomo Nicolini, Thomas O'Halloran, Jean-Marc Ourcival, Matthias Peichl, Elise Pendall, Borja Ruiz Reverter, Marilyn Roland, Simone Sabbatini, Torsten Sachs, Marius Schmidt, Christopher R Schwalm, Ankit Shekhar, Richard Silberstein, Maria Lucia Silveira, Donatella Spano, Torbern Tagesson, Gianluca Tramontana, Carlo Trotta, Fabio Turco, Timo Vesala, Caroline Vincke, Domenico Vitale, Enrique R Vivoni, Yi Wang, William Woodgate, Enrico A Yepez, Junhui Zhang, Donatella Zona, Martin Jung
Feb 7, 2024

Double machine learning for causal hybrid modeling--applications in the Earth sciences

Kai-Hendrik Cohrs, Gherardo Varando, Nuno Carvalhais, Markus Reichstein, Gustau Camps-Valls
APR 4, 2024

Physics Informed Modeling of Ecosystem Respiration via Dynamic Mode Decomposition with Control Input

Maha Shadaydeh, Joachim Denzler, Mirco Migliavacca
Mar 18, 2024

Changing effects of external forcing on Atlantic–Pacific interactions

Soufiane Karmouche, Evgenia Galytska, Gerald A Meehl, Jakob Runge, Katja Weigel, Veronika Eyring
JUN 11, 2024

Bootstrap aggregation and confidence measures to improve time series causal discovery

Kevin Debeire, Andreas Gerhardus, Jakob Runge, Veronika Eyring
Mar 15, 2024

Earth virtualization engines (EVE)

Bjorn Stevens, Stefan Adami, Tariq Ali, Hartwig Anzt, Zafer Aslan, Sabine Attinger, Jaana Bäck, Johanna Baehr, Peter Bauer, Natacha Bernier, Bob Bishop, Hendryk Bockelmann, Sandrine Bony, Veronique Bouchet, Guy Brasseur, David N Bresch, Sean Breyer, Gilbert Brunet, Pier Luigi Buttigieg, Junji Cao, Christelle Castet, Yafang Cheng, Ayantika Dey Choudhury, Deborah Coen, Susanne Crewell, Atish Dabholkar, Qing Dai, Francisco Doblas-Reyes, Dale Durran, Ayoub El Gaidi, Charlie Ewen, Eleftheria Exarchou, Veronika Eyring, Florencia Falkinhoff, David Farrell, Piers M Forster, Ariane Frassoni, Claudia Frauen, Oliver Fuhrer, Shahzad Gani, Edwin Gerber, Debra Goldfarb, Jens Grieger, Nicolas Gruber, Wilco Hazeleger, Rolf Herken, Chris Hewitt, Torsten Koubarakis, Huang-Hsiung Hsu, Daniela Jacob, Alexandra Jahn, Christian Jakob, Thomas Jung, Christopher Kadow, In-Sik Kang, Sarah Kang, Karthik Kashinath, Katharina Kleinen-von Königslöw, Daniel Klocke, Uta Kloenne, Milan Klöwer, Chihiro Kodama, Stefan Kollet, Tobias Kölling, Jenni Kontkanen, Steve Kopp, Michal Koran, Markku Kulmala, Hanna Lappalainen, Fakhria Latifi, Bryan Lawrence, June Yi Lee, Quentin Lejeun, Christian Lessig, Chao Li, Thomas Lippert, Jürg Luterbacher, Pekka Manninen, Jochem Marotzke, Satoshi Matsouoka, Charlotte Merchant, Peter Messmer, Gero Michel, Kristel Michielsen, Tomoki Miyakawa, Jens Müller, Ramsha Munir, Sandeep Narayanasetti, Ousmane Ndiaye, Carlos Nobre, Achim Oberg, Riko Oki, Tuba Özkan-Haller, Tim Palmer, Stan Posey, Andreas Prein, Odessa Primus, Mike Pritchard, Julie Pullen, Dian Putrasahan, Johannes Quaas, Krishnan Raghavan, Venkatachalam Ramaswamy, Markus Rapp, Florian Rauser, Markus Reichstein, Aromar Revi, Sonakshi Saluja, Masaki Satoh, Vera Schemann, Sebastian Schemm, Christina Schnadt Poberaj, Thomas Schulthess, Cath Senior, Jagadish Shukla, Manmeet Singh, Julia Slingo, Adam Sobel, Silvina Solman, Jenna Spitzer, Detlef Stammer, Philip Stier, Thomas Stocker, Sarah Strock, Hang Su, Petteri Taalas, John Taylor, Susann Tegtmeier, Georg Teutsch, Adrian Tompkins, Uwe Ulbrich, Pier-Luigi Vidale, Chien-Ming Wu, Hao Xu, Najibullah Zaki, Laure Zanna, Tianjun Zhou, Florian Ziemen
Apr 30, 2024

Causally‐informed deep learning to improve climate models and projections

Fernando Iglesias‐Suarez, Pierre Gentine, Breixo Solino‐Fernandez, Tom Beucler, Michael Pritchard, Jakob Runge, Veronika Eyring
Feb 19, 2024

Compounding effects in flood drivers challenge estimates of extreme river floods

Shijie Jiang, Larisa Tarasova, Guo Yu, Jakob Zscheischler
Mar 27, 2024

Interpretability of negative latent heat fluxes from eddy covariance measurements in dry conditions

Sinikka J Paulus, Rene Orth, Sung-Ching Lee, Anke Hildebrandt, Martin Jung, Jacob A Nelson, Tarek Sebastian El-Madany, Arnaud Carrara, Gerardo Moreno, Matthias Mauder, Jannis Groh, Alexander Graf, Markus Reichstein, Mirco Migliavacca
Apr 25, 2024

Intercomparison of global foliar trait maps reveals fundamental differences and limitations of upscaling approaches

Benjamin Dechant, Jens Kattge, Ryan Pavlick, Fabian D Schneider, Francesco M Sabatini, Alvaro Moreno-Martinez, Ethan E Butler, Peter M van Bodegom, Helena Vallicrosa, Teja Kattenborn, Coline CF Boonman, Nima Madani, Ian J Wright, Ning Dong, Hannes Feilhauer, Josep Peñuelas, Jordi Sardans, Jesus Aguirre-Gutierrez, Peter B Reich, Pedro J Leitão, Jeannine Cavender-Bares, Isla H Myers-Smith, Sandra M Durán, Holly Croft, I Colin Prentice, Andreas Huth, Karin Rebel, Sönke Zaehle, Irena Šímová, Sandra Diaz, Markus Reichstein, Christopher Schiller, Helge Bruelheide, Miguel Mahecha, Christian Wirth, Yadvinder Malhi, Philip A Townsend
Sep 1, 2024

AI for Extreme Event Modeling and Understanding: Methodologies and Challenges

Gustau Camps-Valls, Miguel-Ángel Fernández-Torres, Kai-Hendrik Cohrs, Adrian Höhl, Andrea Castelletti, Aytac Pacal, Claire Robin, Francesco Martinuzzi, Ioannis Papoutsis, Ioannis Prapas, Jorge Pérez-Aracil, Katja Weigel, Maria Gonzalez-Calabuig, Markus Reichstein, Martin Rabel, Matteo Giuliani, Miguel Mahecha, Oana-Iuliana Popescu, Oscar J Pellicer-Valero, Said Ouala, Sancho Salcedo-Sanz, Sebastian Sippel, Spyros Kondylatos, Tamara Happé, Tristan Williams
Jun 28, 2024

A belowground perspective on the nexus between biodiversity change, climate change, and human well‐being

Nico Eisenhauer, Karin Frank, Alexandra Weigelt, Bartosz Bartkowski, Rémy Beugnon, Katja Liebal, Miguel Mahecha, Martin Quaas, Djamil Al‐Halbouni, Ana Bastos, Friedrich J Bohn, Mariana Madruga de Brito, Joachim Denzler, Hannes Feilhauer, Rico Fischer, Immo Fritsche, Claudia Guimaraes‐Steinicke, Martin Hänsel, Daniel BM Haun, Hartmut Herrmann, Andreas Huth, Heike Kalesse‐Los, Michael Koetter, Nina Kolleck, Melanie Krause, Marlene Kretschmer, Pedro J Leitão, Torsten Masson, Karin Mora, Birgit Müller, Jian Peng, Mira L Pöhlker, Leonie Ratzke, Markus Reichstein, Solveig Richter, Nadja Rüger, Beatriz Sánchez‐Parra, Maha Shadaydeh, Sebastian Sippel, Ina Tegen, Daniela Thrän, Josefine Umlauft, Manfred Wendisch, Kevin Wolf, Christian Wirth, Hannes Zacher, Sönke Zaehle, Johannes Quaas
Jun 11, 2024
2023

Methodological challenges and new perspectives of shifting vegetation phenology in eddy covariance data

Annu Panwar, Mirco Migliavacca, Jacob A Nelson, José Cortés, Ana Bastos, Matthias Forkel, Alexander J Winkler
Aug 24, 2023

Widespread and complex drought effects on vegetation physiology inferred from space

Wantong Li, Javier Pacheco-Labrador, Mirco Migliavacca, Diego Miralles, Anne Hoek van Dijke, Markus Reichstein, Matthias Forkel, Weijie Zhang, Christian Frankenberg, Annu Panwar, Qian Zhang, Ulrich Weber, Pierre Gentine, Rene Orth
Aug 15, 2023

Causal inference for time series

Kai-Hendrik Cohrs, Gherardo Varando, Markus Reichstein, Gustau Camps-Valls
Jun 27, 2023

A joint framework for studying compound ecoclimatic events

Ana Bastos, Sebastian Sippel, Dorothea Frank, Miguel D Mahecha, Sönke Zaehle, Jakob Zscheischler, Markus Reichstein
Apr 18, 2023

Widespread but divergent drought legacy effects on gross primary productivity

Xin Yu, Rene Orth, Markus Reichstein, Michael Bahn, Christian Reimers, Ulisse Gomarasca, Mirco Migliavacca, Dario Papale, Ana Bastos
Nov 13, 2023

Evaluating causal arctic‐midlatitude teleconnections in cmip6

Evgenia Galytska, Katja Weigel, Dörthe Handorf, Ralf Jaiser, Raphael Köhler, Jakob Runge, Veronika Eyring
Sep 16, 2023

Regime-oriented causal model evaluation of Atlantic–Pacific teleconnections in CMIP6

Soufiane Karmouche, Evgenia Galytska, Jakob Runge, Gerald A Meehl, Adam S Phillips, Katja Weigel, Veronika Eyring
Mar 21, 2023

Improving air quality assessment using physics-inspired deep graph learning

Lianfa Li, Jinfeng Wang, Meredith Franklin, Qian Yin, Jiajie Wu, Gustau Camps-Valls, Zhiping Zhu, Chengyi Wang, Yong Ge, Markus Reichstein
Sep 27, 2023

Mixed membership Gaussians

Joachim Giesen, Paul Kahlmeyer, Sören Laue, Matthias Mitterreiter, Frank Nussbaum, Christoph Staudt
May 1, 2023

Why Capsule Neural Networks Do Not Scale: Challenging the Dynamic Parse-Tree

Matthias Mitterreiter, Marcel Koch, Joachim Giesen, Sören Laue
Jun 26, 2023

Analyzing the Behavior of Cauliflower Harvest-Readiness Models by Investigating Feature Relevances

Niklas Penzel, Jana Kierdorf, Ribana Roscher, Joachim Denzler
Dec 25, 2023

Discovering causal relations and equations from data

Gustau Camps-Valls, Andreas Gerhardus, Urmi Ninad, Gherardo Varando, Georg Moreno, Emili Balaguer-Ballester, Ricardo Vinuesa, Emiliano Diaz, Laure Zanna, Jakob Runge
Dec 12, 2023

Leaf-level coordination principles propagate to the ecosystem scale

Ulisse Gomarasca, Mirco Migliavacca, Jens Kattge, Jacob A Nelson, Ülo Niinemets, Christian Wirth, Alessandro Cescatti, Michael Bahn, Richard Nair, Alicia TR Acosta, M Altaf Arain, Mirela Beloiu, T Andrew Black, Hans Henrik Bruun, Solveig Franziska Bucher, Nina Buchmann, Chaeho Byun, Arnaud Carrara, Adriano Conte, Ana C Da Silva, Gregory Duveiller, Silvano Fares, Andreas Ibrom, Alexander Knohl, Benjamin Komac, Jean-Marc Limousin, Christopher H Lusk, Miguel D Mahecha, David Martini, Vanessa Minden, Leonardo Montagnani, Akira S Mori, Yusuke Onoda, Josep Peñuelas, Oscar Perez-Priego, Peter Poschlod, Thomas L Powell, Peter B Reich, Ladislav Šigut, Peter M Van Bodegom, Sophia Walther, Georg Wohlfahrt, Ian J Wright, Markus Reichstein
JUL 4, 2023

Efficient and Portable Einstein Summation in SQL

Mark Blacher, Julien Klaus, Christoph Staudt, Sören Laue, Viktor Leis, Joachim Giesen
JUN 20, 2023

Soil heat extremes can outpace air temperature extremes

Almudena García-García, Francisco José Cuesta-Valero, Diego G Miralles, Miguel D Mahecha, Johannes Quaas, Markus Reichstein, Jakob Zscheischler, Jian Peng
SEP 21, 2023

Publisher Correction: Increasing impact of warm droughts on northern ecosystem productivity over recent decades

David Gampe, Jakob Zscheischler, Markus Reichstein, Michael O’Sullivan, William K Smith, Stephen Sitch, Wolfgang Buermann
JUN 20, 2023

Soil heat extremes outpace their atmospheric counterpart

Francisco José Cuesta-Valero, Diego Miralles, Miguel Mahecha, Johannes Quaas, Markus Reichstein, Jakob Zscheischler, Jian Peng, Almudena Garcia-Garcia 
SEP 20, 2023

Ten new insights in climate science 2023/2024

Mercedes Bustamante, Joyashree Roy, Daniel Ospina, Ploy Achakulwisut, Anubha Aggarwal, Ana Bastos, Wendy Broadgate, Josep G Canadell, Edward R Carr, Deliang Chen, Helen A Cleugh, Kristie L Ebi, Clea Edwards, Carol Farbotko, Marcos Fernández-Martínez, Thomas L Frölicher, Sabine Fuss, Oliver Geden, Nicolas Gruber, Luke J Harrington, Judith Hauck, Zeke Hausfather, Sophie Hebden, Aniek Hebinck, Saleemul Huq, Matthias Huss, M Laurice P Jamero, Sirkku Juhola, Nilushi Kumarasinghe, Shuaib Lwasa, Bishawjit Mallick, Maria Martin, Steven McGreevy, Paula Mirazo, Aditi Mukherji, Greg Muttitt, Gregory F Nemet, David Obura, Chukwumerije Okereke, Tom Oliver, Ben Orlove, Nadia S Ouedraogo, Prabir K Patra, Mark Pelling, Laura M Pereira, Åsa Persson, Julia Pongratz, Anjal Prakash, Anja Rammig, Colin Raymond, Aaron Redman, Cristobal Reveco, Johan Rockström, Regina Rodrigues, David R Rounce, E Lisa F Schipper, Peter Schlosser, Odirilwe Selomane, Gregor Semieniuk, Yunne-Jai Shin, Tasneem A Siddiqui, Vartika Singh, Giles B Sioen, Youba Sokona, Detlef Stammer, Norman J Steinert, Sunhee Suk, Rowan Sutton, Lisa Thalheimer, Vikki Thompson, Gregory Trencher, Kees Van Der Geest, Saskia E Werners, Thea Wübbelmann, Nico Wunderling, Jiabo Yin, Kirsten Zickfeld, Jakob Zscheischler
DEC 1, 2023

Large variability in simulated response of vegetation composition and carbon dynamics to variations in drought‐heat occurrence

Elisabeth Tschumi, Sebastian Lienert, Ana Bastos, Philippe Ciais, Konstantin Gregor, Fortunat Joos, Jürgen Knauer, Philip Papastefanou, Anja Rammig, Karin van der Wiel, Karina Williams, Yidi Xu, Sönke Zaehle, Jakob Zscheischler
MAR 17, 2023

The detection and attribution of extreme reductions in vegetation growth across the global land surface

Hui Yang, Seth M Munson, Chris Huntingford, Nuno Carvalhais, Alan K Knapp, Xiangyi Li, Josep Peñuelas, Jakob Zscheischler, Anping Chen
MAR 17, 2023

High frequency root dynamics: sampling and interpretation using replicated robotic minirhizotrons

Richard Nair, Martin Strube, Martin Hertel, Olaf Kolle, Victor Rolo, Mirco Migliavacca
FEB 5, 2023

Contrasting drought propagation into the terrestrial water cycle between dry and wet regions

Wantong Li, Markus Reichstein, Sungmin O, Carla May, Georgia Destouni, Mirco Migliavacca, Basil Kraft, Ulrich Weber, Rene Orth
JUL 5, 2023

The effect of relative humidity on eddy covariance latent heat flux measurements and its implication for partitioning into transpiration and evaporation

Weijie Zhang, Martin Jung, Mirco Migliavacca, Rafael Poyatos, Diego G Miralles, Tarek S El-Madany, Marta Galvagno, Arnaud Carrara, Nicola Arriga, Andreas Ibrom, Ivan Mammarella, Dario Papale, Jamie R Cleverly, Michael Liddell, Georg Wohlfahrt, Christian Markwitz, Matthias Mauder, Eugenie Paul-Limoges, Marius Schmidt, Sebastian Wolf, Christian Brümmer, M Altaf Arain, Silvano Fares, Tomomichi Kato, Jonas Ardö, Walter Oechel, Chad Hanson, Mika Korkiakoski, Sébastien Biraud, Rainer Steinbrecher, Dave Billesbach, Leonardo Montagnani, William Woodgate, Changliang Shao, Nuno Carvalhais, Markus Reichstein, Jacob A Nelson
MAR 1, 2023

A generalizable normalization for assessing plant functional diversity metrics across scales from remote sensing

Javier Pacheco‐Labrador, Francesco de Bello, Mirco Migliavacca, Xuanlong Ma, Nuno Carvalhais, Christian Wirth
JUN 15, 2023

Seasonal and Inter-Annual Rainfall Patterns Drive Mediterranean Cork Oak Woodland Carbon Uptake and Sequestration

Joana Boavida-Portugal, Catarina Moura, Nuno Carvalhais, Mirco Migliavacca, Tarek S El-Madany, João Silva, Rajchandar Padmanabana, Sofia Cerasoli
FEB 22, 2023

Shifting vegetation phenology in eddy covariance data: Methodological challenges and new perspectives

Annu Panwar, Mirco Migliavacca, Jacob A Nelson, Jose Cortes, Ana Bastos, Matthias Forkel, Alexander J Winkler
MAY 31, 2023

Identifying drivers of river floods using causal inference

Peter Miersch, Shijie Jiang, Oldrich Rakovec, Jakob Zscheischler
MAY 2, 2023
2022

Widespread increasing vegetation sensitivity to soil moisture

Wantong Li, Mirco Migliavacca, Matthias Forkel, Jasper MC Denissen, Markus Reichstein, Hui Yang, Gregory Duveiller, Ulrich Weber, Rene Orth
Jul 8, 2022

Widespread shift from ecosystem energy to water limitation with climate change

Jasper MC Denissen, Adriaan J Teuling, Andy J Pitman, Sujan Koirala, Mirco Migliavacca, Wantong Li, Markus Reichstein, Alexander J Winkler, Chunhui Zhan, Rene Orth
Jul 4, 2022

Contrasting biophysical and societal impacts of hydro-meteorological extremes

Rene Orth, Sungmin O, Jakob Zscheischler, Miguel D Mahecha, Markus Reichstein
Jan 7, 2022

A spatiotemporal stochastic climate model for benchmarking causal discovery methods for teleconnections

Xavier-Andoni Tibau, Christian Reimers, Andreas Gerhardus, Joachim Denzler, Veronika Eyring, Jakob Runge
Sep 27, 2022

ESMValTool

Bouwe Andela, Bjoern Broetz, Lee de Mora, Niels Drost, Veronika Eyring, Nikolay Koldunov, Axel Lauer, Benjamin Mueller, Valeriu Predoi, Mattia Righi, Manuel Schlund, Javier Vegas-Regidor, Klaus Zimmermann, Kemisola Adeniyi, Enrico Arnone, Omar Bellprat, Peter Berg, Lisa Bock, Louis-Philippe Caron, Nuno Carvalhais, Irene Cionni, Nicola Cortesi, Susanna Corti, Bas Crezee, Edouard Leopold Davin, Paolo Davini, Clara Deser, Faruk Diblen, David Docquier, Laura Dreyer, Carsten Ehbrecht, Paul Earnshaw, Bettina Gier, Nube Gonzalez-Reviriego, Paul Goodman, Stefan Hagemann, Jost von Hardenberg, Birgit Hassler, Alasdair Hunter, Christopher Kadow, Stephan Kindermann, Sujan Koirala, Llorenç Lledó, Quentin Lejeune, Valerio Lembo, Bill Little, Saskia Loosveldt-Tomas, Ruth Lorenz, Tomas Lovato, Valerio Lucarini, François Massonnet, Christian Wilhelm Mohr, Eduardo Moreno-Chamarro, Pandde Amarjiit, Núria Pérez-Zanón, Adam Phillips, Joellen Russell, Marit Sandstad, Alistair Sellar, Daniel Senftleben, Federico Serva, Jana Sillmann, Tobias Stacke, Ranjini Swaminathan, Verónica Torralba, Katja Weigel, Charles Roberts, Peter Kalverla, Sarah Alidoost, Stefan Verhoeven, Barbara Vreede, Stef Smeets, Abel Soares Siqueira, Rémi Kazeroni Zenodo
Jul 25, 2022

Optimization for Classical Machine Learning Problems on the GPU

Sören Laue, Mark Blacher, Joachim Giesen
MAR 30, 2022

Optimization for Classical Machine Learning Problems on the GPU

Sören Laue, Mark Blacher, Joachim Giesen
Aug 28, 2022

Machine Learning, Linear Algebra, and More: Is SQL All You Need?

Mark Blacher, Joachim Giesen, Sören Laue, Julien Klaus, Viktor Leis
Sep 2022

Combining system modeling and machine learning into hybrid ecosystem modeling

Markus Reichstein, Bernhard Ahrens, Basil Kraft, Gustau Camps-Valls, Nuno Carvalhais, Fabian Gans, Pierre Gentine, Alexander J Winkler
Aug 15, 2022

Convexity Certificates from Hessians
Julien Klaus, Niklas Merk, Konstantin Wiedom, Sören Laue, Joachim Giesen
CoRR abs/2210.10430 (2022)
https://doi.org/10.48550/arXiv.2210.10430

The GENO Software Stack

Joachim Giesen, Lars Kuehne, Sören Laue

Algorithms for Big Data 2022: 213-228
https://doi.org/10.1007/978-3-031-21534-6_12

Biodiversity loss and climate extremes—study the feedbacks

Miguel D Mahecha, Ana Bastos, Friedrich J Bohn, Nico Eisenhauer, Hannes Feilhauer, Henrik Hartmann, Thomas Hickler, Heike Kalesse-Los, Mirco Migliavacca, Friederike EL Otto, Jian Peng, Johannes Quaas, Ina Tegen, Alexandra Weigelt, Manfred Wendisch, Christian Wirth
Nature 612 (7938), 30-32

https://doi.org/10.1038/d41586-022-04152-y

Challenging the link between functional and spectral diversity with radiative transfer modeling and data

Javier Pacheco-Labrador, Mirco Migliavacca, Xuanlong Ma, Miguel Mahecha, Nuno Carvalhais, Ulrich Weber, Raquel Benavides, Olivier Bouriaud, Ionut Barnoaiea, David A Coomes, Friedrich J Bohn, Guido Kraemer, Uta Heiden, Andreas Huth, Christian Wirth
Remote Sensing of Environment 280, 113170
https://doi.org/10.1016/j.rse.2022.113170

Evaluating the Potential of Desis to Infer Plant Taxonomical and Functional Diversities in European Forests

J Pacheco-Labrador, U Weber, X Ma, MD Mahecha, N Carvalhais, C Wirth, A Huth, FJ Bohn, G Kraemer, U Heiden, M Migliavacca
The International Archives of Photogrammetry, Remote Sensing and Spatial Information Sciences
https://doi.org/10.5194/isprs-archives-XLVI-1-W1-2021-49-2022


Decoupling between ecosystem photosynthesis and transpiration: a last resort against overheating

Christopher Krich, Miguel D Mahecha, Mirco Migliavacca, Martin G De Kauwe, Anne Griebel, Jakob Runge, Diego G Miralles
Environmental Research Letters 17 (4), 044013
https://doi.org/10.1088/1748-9326/ac583e

Wildfire danger prediction and understanding with Deep Learning

Spyros Kondylatos, Ioannis Prapas, Michele Ronco, Ioannis Papoutsis, Gustau Camps‐Valls, María Piles, Miguel‐Ángel Fernández‐Torres, Nuno Carvalhais
Geophysical Research Letters 49 (17), e2022GL099368
https://doi.org/10.1029/2022GL099368

Physics-aware nonparametric regression models for Earth data analysis

Jordi Cortés-Andrés, Gustau Camps-Valls, Sebastian Sippel, Enikő Székely, Dino Sejdinovic, Emiliano Diaz, Adrián Pérez-Suay, Zhu Li, Miguel Mahecha, Markus Reichstein

Environmental Research Letters 17 (5), 054034
http://doi.org/10.1088/1748-9326/ac6762

Emergence of the physiological effects of elevated CO2 on land–atmosphere exchange of carbon and water

Chunhui Zhan, René Orth, Mirco Migliavacca, Sönke Zaehle, Markus Reichstein, Jan Engel, Anja Rammig, Alexander J Winkler

Global Change Biology 28 (24), 7313-7326
https://doi.org/10.1111/gcb.16397

Evergreen broadleaf greenness and its relationship with leaf flushing, aging, and water fluxes

Yunpeng Luo, Javier Pacheco-Labrador, Andrew D Richardson, Bijan Seyednasrollah, Oscar Perez-Priego, Rosario Gonzalez-Cascon, M Pilar Martín, Gerardo Moreno, Richard Nair, Thomas Wutzler, Solveig Franziska Bucher, Arnaud Carrara, Edoardo Cremonese, Tarek S El-Madany, Gianluca Filippa, Marta Galvagno, Tiana Hammer, Xuanlong Ma, David Martini, Qian Zhang, Markus Reichstein, Annette Menzel, Christine Römermann, Mirco Migliavacca

Agricultural and Forest Meteorology 323, 109060
https://doi.org/10.1016/j.agrformet.2022.109060

High-resolution large weighing lysimeter measurements with meteorological and soil-hydrological variables from a Mediterranean Savanna

Sinikka Paulus, Tarek S El-Madany, Thomas Wutzler, Arnaud Carrara, Gerardo M Moreno, Markus Reichstein, René Orth, Martin Hertel, Ramon López-Jimenez, Mirco Migliavacca

Revisiting global vegetation controls using multi-layer soil moisture

Wantong Li, Mirco Migliavacca, Matthias Forkel, Sophia Walther, Markus Reichstein, Rene Orth

Authorea Preprints

https://hdl.handle.net/21.11116/0000-000D-3EC5-0 

Heatwave breaks down the linearity between sun‐induced fluorescence and gross primary production

David Martini, Karolina Sakowska, Georg Wohlfahrt, Javier Pacheco‐Labrador, Christiaan Van der Tol, Albert Porcar‐Castell, Troy S Magney, Arnaud Carrara, Roberto Colombo, Tarek S El‐Madany, Rosario Gonzalez‐Cascon, María Pilar Martín, Tommaso Julitta, Gerardo Moreno, Uwe Rascher, Markus Reichstein, Micol Rossini, Mirco Migliavacca
New Phytologist 233 (6), 2415-2428
https://doi.org/10.1111/nph.17920

On the potential of Sentinel-2 for estimating Gross Primary Production

Daniel E Pabon-Moreno, Mirco Migliavacca, Markus Reichstein, Miguel D Mahecha
IEEE Transactions on Geoscience and Remote Sensing 60, 1-12
https://doi.org/10.1109/TGRS.2022.3152272

Partitioning of net ecosystem exchange using dynamic mode decomposition and time delay embedding

Maha Shadaydeh, Joachim Denzler, Mirco Migliavacca
Engineering Proceedings 18 (1), 13
https://doi.org/10.3390/engproc2022018013

Contrasting drought legacy effects on gross primary productivity in a mixed versus pure beech forest

Xin Yu, René Orth, Markus Reichstein, Michael Bahn, Anne Klosterhalfen, Alexander Knohl, Franziska Koebsch, Mirco Migliavacca, Martina Mund, Jacob A Nelson, Benjamin D Stocker, Sophia Walther, Ana Bastos
Biogeosciences Discussions 2022, 1-27
https://doi.org/10.5194/bg-19-4315-2022

Uncovering the critical soil moisture thresholds of plant water stress for European ecosystems

Zheng Fu, Philippe Ciais, David Makowski, Ana Bastos, Paul C Stoy, Andreas Ibrom, Alexander Knohl, Mirco Migliavacca, Matthias Cuntz, Ladislav Šigut, Matthias Peichl, Denis Loustau, Tarek S El‐Madany, Nina Buchmann, Mana Gharun, Ivan Janssens, Christian Markwitz, Thomas Grünwald, Corinna Rebmann, Meelis Mölder, Andrej Varlagin, Ivan Mammarella, Pasi Kolari, Christian Bernhofer, Michal Heliasz, Caroline Vincke, Andrea Pitacco, Edoardo Cremonese, Lenka Foltýnová, Jean‐Pierre Wigneron
Global Change Biology 28 (6), 2111-2123
https://doi.org/10.1111/gcb.16050

A view from space on global flux towers by MODIS and Landsat: the FluxnetEO data set

Sophia Walther, Simon Besnard, Jacob Allen Nelson, Tarek Sebastian El-Madany, Mirco Migliavacca, Ulrich Weber, Nuno Carvalhais, Sofia Lorena Ermida, Christian Brümmer, Frederik Schrader, Anatoly Stanislavovich Prokushkin, Alexey Vasilevich Panov, Martin Jung

Biogeosciences 19 (11), 2805-2840
https://doi.org/10.5194/bg-19-2805-2022

Narrow but robust advantages in two-big-leaf light use efficiency models over big-leaf light use efficiency models at ecosystem level

Shanning Bao, Andreas Ibrom, Georg Wohlfahrt, Sujan Koirala, Mirco Migliavacca, Qian Zhang, Nuno Carvalhais
Agricultural and Forest Meteorology 326, 109185
https://doi.org/10.1016/j.agrformet.2022.109185

Environment-sensitivity functions for gross primary productivity in light use efficiency models

Shanning Bao, Thomas Wutzler, Sujan Koirala, Matthias Cuntz, Andreas Ibrom, Simon Besnard, Sophia Walther, Ladislav Šigut, Alvaro Moreno, Ulrich Weber, Georg Wohlfahrt, Jamie Cleverly, Mirco Migliavacca, William Woodgate, Lutz Merbold, Elmar Veenendaal, Nuno Carvalhais
Agricultural and Forest Meteorology 312, 108708
https://doi.org/10.1016/j.agrformet.2021.108708

River flooding mechanisms and their changes in Europe revealed by explainable machine learning
Shijie Jiang, Emanuele Bevacqua, Jakob Zscheischler
Hydrology and Earth System Sciences 26, 6339–6359

2021 (21)

The three major axes of terrestrial ecosystem function

Mirco Migliavacca, Talie Musavi, Miguel D Mahecha, Jacob A Nelson, Jürgen Knauer, Dennis D Baldocchi, Oscar Perez-Priego, Rune Christiansen, Jonas Peters, Karen Anderson, Michael Bahn, T Andrew Black, Peter D Blanken, Damien Bonal, Nina Buchmann, Silvia Caldararu, Arnaud Carrara, Nuno Carvalhais, Alessandro Cescatti, Jiquan Chen, Jamie Cleverly, Edoardo Cremonese, Ankur R Desai, Tarek S El-Madany, Martha M Farella, Marcos Fernández-Martínez, Gianluca Filippa, Matthias Forkel, Marta Galvagno, Ulisse Gomarasca, Christopher M Gough, Mathias Göckede, Andreas Ibrom, Hiroki Ikawa, Ivan A Janssens, Martin Jung, Jens Kattge, Trevor F Keenan, Alexander Knohl, Hideki Kobayashi, Guido Kraemer, Beverly E Law, Michael J Liddell, Xuanlong Ma, Ivan Mammarella, David Martini, Craig Macfarlane, Giorgio Matteucci, Leonardo Montagnani, Daniel E Pabon-Moreno, Cinzia Panigada, Dario Papale, Elise Pendall, Josep Penuelas, Richard P Phillips, Peter B Reich, Micol Rossini, Eyal Rotenberg, Russell L Scott, Clement Stahl, Ulrich Weber, Georg Wohlfahrt, Sebastian Wolf, Ian J Wright, Dan Yakir, Sönke Zaehle, Markus Reichstein
Nature 598 (7881), 468-472
https://doi.org/10.1038/s41586-021-03939-9

Deep learning for the Earth Sciences: A comprehensive approach to remote sensing, climate science and geosciences

Gustau Camps-Valls, Devis Tuia, Xiao Xiang Zhu, Markus Reichstein
John Wiley & Sons
https://scholar.google.de/citations?view_op=view_citation&hl=de&user=XCkp5uEAAAAJ&cstart=100&pagesize=100&sortby=pubdate&citation_for_view=XCkp5uEAAAAJ:1PZZLG1Z4vcC

Increasing impact of warm droughts on northern ecosystem productivity over recent decades

David Gampe, Jakob Zscheischler, Markus Reichstein, Michael O’Sullivan, William K Smith, Stephen Sitch, Wolfgang Buermann

Nature Climate Change 11 (9), 772-779
https://doi.org/10.1038/s41558-021-01112-8

Guidelines for studying diverse types of compound weather and climate events

Emanuele Bevacqua, Carlo De Michele, Colin Manning, Anaïs Couasnon, Andreia FS Ribeiro, Alexandre M Ramos, Edoardo Vignotto, Ana Bastos, Suzana Blesić, Fabrizio Durante, John Hillier, Sérgio C Oliveira, Joaquim G Pinto, Elisa Ragno, Pauline Rivoire, Kate Saunders, Karin van der Wiel, Wenyan Wu, Tianyi Zhang, Jakob Zscheischler
Earth's Future 9 (11), e2021EF002340
https://doi.org/10.1029/2021EF002340

Sun-Induced and Active Fluorescence as a Tool to Understand Plants Transpiration

David Martini, Karolina Sakowska, Georg Wohlfahrt, Javier Pacheco-Labrador, Christiaan van der Tol, Tarek El-Madany, Markus Reichstein, Mirco Migliavacca
AGU Fall Meeting Abstracts 2021, B22C-04
https://ui.adsabs.harvard.edu/abs/2021AGUFM.B22C..04M/abstract

Monitoring forest health using hyperspectral imagery: Does feature selection improve the performance of machine-learning techniques?

Patrick Schratz, Jannes Muenchow, Eugenia Iturritxa, José Cortés, Bernd Bischl, Alexander Brenning
Remote Sensing 13 (23), 4832
https://doi.org/10.3390/rs13234832

A regional Earth system data lab for understanding ecosystem dynamics: An example from tropical South America 
Lina M Estupinan-Suarez, Fabian Gans, Alexander Brenning, Victor H Gutierrez-Velez, Maria C Londono, Daniel E Pabon-Moreno, Germán Poveda, Markus Reichstein, Björn Reu, Carlos A Sierra, Ulrich Weber, Miguel D Mahecha
Frontiers in Earth Science 9, 613395
https://doi.org/10.3389/feart.2021.613395

Deepcube: Explainable Ai Pipelines for Big Copernicus Data

Ioannis Papoutsis, Alkyoni Baglatzi, Souzana Touloumtzi, Markus Reichstein, Nuno Carvalhais, Fabian Gans, Gustau Camps-Valls, Maria Piles, Theofilos Kakantousis, Jim Dowling, Manolis Koubarakis, Dimitris Bilidas, Despina-Athanasia Pantazi, George Stamoulis, Christophe Demange, Léo-Gad Journel, Marco Bianchi, Chiara Gervasi, Alessio Rucci, Ioannis Tsampoulatidis, Eleni Kamateri, Tarek Habib, Alejandro Dıaz Bolıvar, Zisoula Ntasiou10, Anastasios Paschalis
https://www.bigdatafromspace2021.org

Method of Moments for Topic Models with Mixed Discrete and Continuous Features
Joachim Giesen, Paul Kahlmeyer, Sören Laue, Matthias Mitterreiter, Frank Nussbaum, Christoph Staudt, Sina Zarrieß
IJCAI 2021: 2418-2424
https://doi.org/10.24963/ijcai.2021/333

Timing matters–the importance of “when” droughts and temperature anomalies occur in the Iberian Peninsula

EI-Madany Tarek, Arnaud Carrara, Gerardo Moreno, M Pilar Martin, Javier Pacheco-Labrador, Ulrich Weber, Sebastian Sippel, Miguel Mahecha, Markus Reichstein, Mirco Migliavacca
EGU21
https://doi.org/10.5194/egusphere-egu21-6428

Where are global vegetation greening and browning trends significant?

José Cortés, Miguel D Mahecha, Markus Reichstein, Ranga B Myneni, Chi Chen, Alexander Brenning
Geophysical Research Letters 48 (6), e2020GL091496
https://doi.org/10.1029/2020GL091496

A unified vegetation index for quantifying the terrestrial biosphere

Gustau Camps-Valls, Manuel Campos-Taberner, Álvaro Moreno-Martínez, Sophia Walther, Grégory Duveiller, Alessandro Cescatti, Miguel D Mahecha, Jordi Muñoz-Marí, Francisco Javier García-Haro, Luis Guanter, Martin Jung, John A Gamon, Markus Reichstein, Steven W Running
Science Advances 7 (9), eabc7447
https://doi.org/10.1126/sciadv.abc7447

Functional convergence of biosphere-atmosphere interactions in response to meteorological conditions

Christopher Krich, Mirco Migliavacca, Diego Miralles, Guido Kraemer, Tarek S El-Madany, Markus Reichstein, Jakob Runge, Miguel D Mahecha
Biogeosciences 18 (7), 2379-2404
https://doi.org/10.5194/bg-18-2379-2021

Time‐Scale Dependent Relations Between Earth Observation Based Proxies of Vegetation Productivity

Nora Linscheid, Miguel D Mahecha, Anja Rammig, Nuno Carvalhais, Fabian Gans, Jacob A Nelson, Sophia Walther, Ulrich Weber, Markus Reichstein
Geophysical Research Letters 48 (24), e2021GL093285
https://doi.org/10.1029/2021GL093285

The global forest above-ground biomass pool for 2010 estimated from high-resolution satellite observations

Maurizio Santoro, Oliver Cartus, Nuno Carvalhais, Danaë Rozendaal, Valerio Avitabile, Arnan Araza, Sytze De Bruin, Martin Herold, Shaun Quegan, Pedro Rodríguez-Veiga, Heiko Balzter, João Carreiras, Dmitry Schepaschenko, Mikhail Korets, Masanobu Shimada, Takuya Itoh, Álvaro Moreno Martínez, Jura Cavlovic, Roberto Cazzolla Gatti, Polyanna da Conceição Bispo, Nasheta Dewnath, Nicolas Labrière, Jingjing Liang, Jeremy Lindsell, Edward TA Mitchard, Alexandra Morel, Ana Maria Pacheco Pascagaza, Casey M Ryan, Ferry Slik, Gaia Vaglio Laurin, Hans Verbeeck, Arief Wijaya, Simon Willcock
Earth System Science Data 13 (8), 3927-3950
https://doi.org/10.5194/essd-13-3927-2021

Empirical estimates of regional carbon budgets imply reduced global soil heterotrophic respiration

Philippe Ciais, Yitong Yao, Thomas Gasser, Alessandro Baccini, Yilong Wang, Ronny Lauerwald, Shushi Peng, Ana Bastos, Wei Li, Peter A Raymond, Josep G Canadell, Glen P Peters, Rob J Andres, Jinfeng Chang, Chao Yue, A Johannes Dolman, Vanessa Haverd, Jens Hartmann, Goulven Laruelle, Alexandra G Konings, Anthony W King, Yi Liu, Sebastiaan Luyssaert, Fabienne Maignan, Prabir K Patra, Anna Peregon, Pierre Regnier, Julia Pongratz, Benjamin Poulter, Anatoly Shvidenko, Riccardo Valentini, Rong Wang, Grégoire Broquet, Yi Yin, Jakob Zscheischler, Bertrand Guenet, Daniel S Goll, Ashley-P Ballantyne, Hui Yang, Chunjing Qiu, Dan Zhu
National Science Review 8 (2), nwaa145
https://doi.org/10.1093/nsr/nwaa145

Lysimeter based evaporation and condensation dynamics in a Mediterranean ecosystem

Sinikka Paulus, Tarek S El-Madany, René Orth, Anke Hildebrandt, Thomas Wutzler, Arnaud Carrara, Gerardo Moreno, Oscar Perez-Priego, Olaf Kolle, Markus Reichstein, Mirco Migliavacca
Hydrology and Earth System Sciences Discussions 2021, 1-29
https://doi.org/10.5194/hess-26-6263-2022

Revisiting global vegetation controls using multi‐layer soil moisture

Wantong Li, Mirco Migliavacca, Matthias Forkel, Sophia Walther, Markus Reichstein, René OrthGeophysical Research Letters 48 (11), e2021GL092856
https://doi.org/10.1029/2021GL092856

How nitrogen and phosphorus availability change water use efficiency in a Mediterranean savanna ecosystem

Tarek S El‐Madany, Markus Reichstein, Arnaud Carrara, M Pilar Martín, Gerardo Moreno, Rosario Gonzalez‐Cascon, Josep Peñuelas, David S Ellsworth, Vicente Burchard‐Levine, Tiana W Hammer, Jürgen Knauer, Olaf Kolle, Yunpeng Luo, Javier Pacheco‐Labrador, Jacob A Nelson, Oscar Perez‐Priego, Victor Rolo, Thomas Wutzler, Mirco Migliavacca
Journal of Geophysical Research: Biogeosciences 126 (5), e2020JG006005
https://doi.org/10.1029/2020JG006005

senSCOPE: Modeling mixed canopies combining green and brown senesced leaves. Evaluation in a Mediterranean Grassland

Javier Pacheco-Labrador, Tarek S El-Madany, Christiaan Van der Tol, M Pilar Martin, Rosario Gonzalez-Cascon, Oscar Perez-Priego, Jinhong Guan, Gerardo Moreno, Arnaud Carrara, Markus Reichstein, Mirco Migliavacca
Remote Sensing of Environment 257, 112352
https://doi.org/10.1016/j.rse.2021.112352

Weakly supervised segmentation pretraining for plant cover prediction

Matthias Körschens, Paul Bodesheim, Christine Römermann, Solveig Franziska Bucher, Mirco Migliavacca, Josephine Ulrich, Joachim Denzler
DAGM German Conference on Pattern Recognition, 589-603
https://doi.org/10.1007/978-3-030-92659-5_38

2021

Bottom-up identification of key elements of compound events

Emanuele Bevacqua, Carlo De Michele, Colin Manning, Anaıs Couasnon, Andreia FS Ribeiro, Alexandre M Ramos, Edoardo Vignotto, Ana Bastos, Suzana Blesic, Fabrizio Durante, John Hillier, Sérgio C Oliveira, Joaquim G Pinto, Elisa Ragno, Pauline Rivoire, Kate Saunders, Karin Van Der Wiel, Wenyan Wu, Tianyi Zhang, Jakob Zscheischler 
Aug 23, 2021

Dr. Conrad H. PHILIPP
European Laboratory for Learning and Intelligent Systems (ELLIS)
ELLIS Unit Jena | Project Coordinator